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	<id>https://wiki.pymol.org/api.php?action=feedcontributions&amp;feedformat=atom&amp;user=Whyagaintango</id>
	<title>PyMOL Wiki - User contributions [en]</title>
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	<updated>2026-04-14T22:47:18Z</updated>
	<subtitle>User contributions</subtitle>
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	<entry>
		<id>https://wiki.pymol.org/index.php?title=MovieSchool_6&amp;diff=7037</id>
		<title>MovieSchool 6</title>
		<link rel="alternate" type="text/html" href="https://wiki.pymol.org/index.php?title=MovieSchool_6&amp;diff=7037"/>
		<updated>2009-10-09T06:54:17Z</updated>

		<summary type="html">&lt;p&gt;Whyagaintango: /* Exporting your Movie */  cleaned up save movie as mpeg&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;== Exporting your Movie ==&lt;br /&gt;
This wiki already has lots of information on how to convert your PyMOL movie to another format.  Check out [[Making_Movies|those]] [[Software_Codecs|pages]].&lt;br /&gt;
&lt;br /&gt;
Once you've setup your movie as in any of the previous examples, you have a couple options for making a movie.&lt;br /&gt;
&lt;br /&gt;
'''Export from PyMOL''': Newer PyMOLs support &lt;br /&gt;
*File&amp;amp;rarr;Save Movie As&amp;amp;rarr;MPEG&lt;br /&gt;
*File&amp;amp;rarr;Save Movie As&amp;amp;rarr;PNG Images&lt;br /&gt;
from the menu.&lt;br /&gt;
&lt;br /&gt;
'''mpeg''': This needs a bit of work. The following instructions work with trunk (1.2r2pre). Compile pymol trunk. &lt;br /&gt;
&lt;br /&gt;
Checkout [http://freemol.org freemol] source from &lt;br /&gt;
&amp;lt;source lang=&amp;quot;bash&amp;quot;&amp;gt;&lt;br /&gt;
svn co svn://bioinformatics.org/svnroot/freemol/trunk freemol-trunk&lt;br /&gt;
&amp;lt;/source&amp;gt;&lt;br /&gt;
This creates a directory called '''freemol-trunk'''. &lt;br /&gt;
Inside '''freemol-trunk''' is a directory called '''freemol'''.&lt;br /&gt;
Now you need to setenv (or export) a variable called FREEMOL pointing to the above folder - '''freemol''').&lt;br /&gt;
&amp;lt;source lang=&amp;quot;bash&amp;quot;&amp;gt;&lt;br /&gt;
setenv /my/long/path/to/freemol-trunk/freemol&lt;br /&gt;
cd freemol-trunk/src/mpeg_encode&lt;br /&gt;
&amp;lt;/source&amp;gt;&lt;br /&gt;
(Ignore all other directories inside directory '''src'''. These were unnecessary, at least for me. No need make install).&lt;br /&gt;
&amp;lt;source lang=&amp;quot;bash&amp;quot;&amp;gt;&lt;br /&gt;
./configure&lt;br /&gt;
make&lt;br /&gt;
&amp;lt;/source&amp;gt;&lt;br /&gt;
Add these two lines&lt;br /&gt;
&amp;lt;source lang=&amp;quot;bash&amp;quot;&amp;gt;&lt;br /&gt;
FREEMOL=/my/long/path/to/freemol-trunk/freemol&lt;br /&gt;
export FREEMOL&lt;br /&gt;
&amp;lt;/source&amp;gt;&lt;br /&gt;
to your pymol script. Launch pymol and '''Save Movie as MPEG''' should work now. No need of any complicated codecs.&lt;br /&gt;
&lt;br /&gt;
'''mpng''': You can still use the good old [[mpng]] option to save all your frames to disk.  You can then compile them into a MPEG (see below).&lt;br /&gt;
&lt;br /&gt;
'''Old Style''': One of the older scripting styles was to make minor changes and dump PNGs.  This is essentially obviated with PyMOL's new movie-making functionality.  The '''old style''' was to simply call cmd.png every time you made a scene change.&lt;br /&gt;
&lt;br /&gt;
Hints:&lt;br /&gt;
* Movie not ray traced?  Make sure you set ray_trace_frames to 1.&lt;br /&gt;
&lt;br /&gt;
=== Codecs ===&lt;br /&gt;
See [[Software_Codecs]] for information on how to stitch together movies from PNGs and optimize them for great crisp-looking movies.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[MovieSchool_5| &amp;amp;larr; Previous Lesson]]&lt;br /&gt;
&lt;br /&gt;
[[MovieSchool| Back to Start]]&lt;br /&gt;
&lt;br /&gt;
[[Category:Movies]]&lt;br /&gt;
[[Category:Tutorials]]&lt;/div&gt;</summary>
		<author><name>Whyagaintango</name></author>
	</entry>
	<entry>
		<id>https://wiki.pymol.org/index.php?title=MovieSchool_6&amp;diff=7036</id>
		<title>MovieSchool 6</title>
		<link rel="alternate" type="text/html" href="https://wiki.pymol.org/index.php?title=MovieSchool_6&amp;diff=7036"/>
		<updated>2009-10-08T15:28:39Z</updated>

		<summary type="html">&lt;p&gt;Whyagaintango: /* Exporting your Movie */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;== Exporting your Movie ==&lt;br /&gt;
This wiki already has lots of information on how to convert your PyMOL movie to another format.  Check out [[Making_Movies|those]] [[Software_Codecs|pages]].&lt;br /&gt;
&lt;br /&gt;
Once you've setup your movie as in any of the previous examples, you have a couple options for making a movie.&lt;br /&gt;
&lt;br /&gt;
'''Export from PyMOL''': Newer PyMOLs support &lt;br /&gt;
*File&amp;amp;rarr;Save Movie As&amp;amp;rarr;MPEG&lt;br /&gt;
*File&amp;amp;rarr;Save Movie As&amp;amp;rarr;PNG Images&lt;br /&gt;
from the menu.&lt;br /&gt;
&lt;br /&gt;
'''mpeg''': This needs a bit of work. The following instructions work with trunk (1.2r2pre). Compile pymol trunk. &lt;br /&gt;
&lt;br /&gt;
checkout freemol from &lt;br /&gt;
&amp;lt;source lang=&amp;quot;bash&amp;quot;&amp;gt;&lt;br /&gt;
svn co svn://bioinformatics.org/svnroot/freemol/trunk freemol-trunk&lt;br /&gt;
&amp;lt;/source&amp;gt;&lt;br /&gt;
This creates a directory called freemol-trunk&lt;br /&gt;
Inside this is a directory called freemol&lt;br /&gt;
Now you need to setenv (or export) a variable called FREEMOL pointing to the above folder)&lt;br /&gt;
&amp;lt;source lang=&amp;quot;bash&amp;quot;&amp;gt;&lt;br /&gt;
setenv /my/long/path/to/freemol-trunk/freemol&lt;br /&gt;
cd freemol-trunk/src/mpeg_encode&lt;br /&gt;
&amp;lt;/source&amp;gt;&lt;br /&gt;
(Ignore all other directories inside source. These were unnecessary, at least for me. No need make install).&lt;br /&gt;
&amp;lt;source lang=&amp;quot;bash&amp;quot;&amp;gt;&lt;br /&gt;
./configure&lt;br /&gt;
make&lt;br /&gt;
&amp;lt;/source&amp;gt;&lt;br /&gt;
Add these two lines&lt;br /&gt;
&amp;lt;source lang=&amp;quot;bash&amp;quot;&amp;gt;&lt;br /&gt;
FREEMOL=/my/long/path/to/freemol-trunk/freemol&lt;br /&gt;
export FREEMOL&lt;br /&gt;
&amp;lt;/source&amp;gt;&lt;br /&gt;
to your pymol script. Launch pymol and '''Save Movie as MPEG''' should work now. No need of any complicated codecs.&lt;br /&gt;
&lt;br /&gt;
'''mpng''': You can still use the good old [[mpng]] option to save all your frames to disk.  You can then compile them into a MPEG (see below).&lt;br /&gt;
&lt;br /&gt;
'''Old Style''': One of the older scripting styles was to make minor changes and dump PNGs.  This is essentially obviated with PyMOL's new movie-making functionality.  The '''old style''' was to simply call cmd.png every time you made a scene change.&lt;br /&gt;
&lt;br /&gt;
Hints:&lt;br /&gt;
* Movie not ray traced?  Make sure you set ray_trace_frames to 1.&lt;br /&gt;
&lt;br /&gt;
=== Codecs ===&lt;br /&gt;
See [[Software_Codecs]] for information on how to stitch together movies from PNGs and optimize them for great crisp-looking movies.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
[[MovieSchool_5| &amp;amp;larr; Previous Lesson]]&lt;br /&gt;
&lt;br /&gt;
[[MovieSchool| Back to Start]]&lt;br /&gt;
&lt;br /&gt;
[[Category:Movies]]&lt;br /&gt;
[[Category:Tutorials]]&lt;/div&gt;</summary>
		<author><name>Whyagaintango</name></author>
	</entry>
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