https://wiki.pymol.org/api.php?action=feedcontributions&feedformat=atom&user=Esbenjannik 2026-06-14T01:24:09Z User contributions MediaWiki 1.35.1 https://wiki.pymol.org/index.php?title=Dot_radius&diff=3612 2007-07-02T07:48:09Z

<p>Esbenjannik: New page: the setting dot_radius set the size for dots in ray tracing. Default is 0, where it follows dot_width</p> <hr /> <div>the setting dot_radius set the size for dots in ray tracing.<br /> <br /> Default is 0, where it follows [[dot_width]]</div>

Esbenjannik https://wiki.pymol.org/index.php?title=Settings&diff=10139 2007-07-02T07:46:34Z

<p>Esbenjannik: </p> <hr /> <div>These are all the PyMol settings. If you feel like documenting them, and what they do, feel free. 42 done, 476 to go !<br /> <br /> active_selections ray_default_renderer <br /> [[all_states]] ray_direct_shade <br /> [[ambient]] ray_hint_camera <br /> angle_label_position ray_hint_shadow <br /> angle_size ray_improve_shadows <br /> animation ray_interior_color <br /> animation_duration ray_interior_mode <br /> [[antialias]] ray_interior_reflect <br /> async_builds ray_interior_shadows <br /> [[atom_name_wildcard]] ray_interior_texture <br /> auto_classify_atoms ray_legacy_lighting <br /> auto_color ray_max_passes <br /> auto_dss [[ray_opaque_background]] <br /> auto_hide_selections [[ray_orthoscopic]] <br /> auto_indicate_flags ray_oversample_cutoff <br /> auto_number_selections ray_pixel_scale <br /> auto_remove_hydrogens [[ray_shadow]] <br /> auto_sculpt ray_shadow_decay_factor <br /> auto_show_lines ray_shadow_decay_range <br /> auto_show_nonbonded ray_shadow_fudge <br /> auto_show_selections [[ray_shadows]] <br /> auto_show_spheres ray_texture <br /> [[auto_zoom]] ray_texture_settings <br /> [[backface_cull]] ray_trace_depth_factor <br /> batch_prefix ray_trace_disco_factor <br /> [[bg_rgb]] [[ray_trace_fog]] <br /> bonding_vdw_cutoff ray_trace_fog_start <br /> button_mode [[ray_trace_frames]] <br /> button_mode_name ray_trace_gain <br /> cache_display [[Ray#Modes|ray_trace_mode]]<br /> cache_frames ray_trace_slope_factor <br /> cache_memory ray_transparency_contrast <br /> [[cartoon_color]] ray_transparency_shadows <br /> [[Cartoon Helix Settings|cartoon_cylindrical_helices]] ray_transparency_spec_cut <br /> cartoon_debug ray_transparency_specular <br /> [[cartoon_discrete_colors]] ray_triangle_fudge <br /> [[cartoon_dumbbell_length]] [[reflect]] <br /> [[cartoon_dumbbell_radius]] reflect_power <br /> [[cartoon_dumbbell_width]] retain_order <br /> [[Cartoon Helix Settings|cartoon_fancy_helices]] [[ribbon_color]] <br /> [[cartoon_fancy_sheets]] ribbon_nucleic_acid_mode <br /> [[cartoon_flat_cycles]] ribbon_power <br /> [[cartoon_flat_sheets]] ribbon_power_b <br /> [[Cartoon_helix_radius]] ribbon_radius <br /> [[cartoon_highlight_color]] [[ribbon_sampling]] <br /> cartoon_ladder_color ribbon_side_chain_helper <br /> cartoon_ladder_mode [[ribbon_smooth]] <br /> cartoon_ladder_radius ribbon_throw <br /> cartoon_loop_cap ribbon_trace_atoms <br /> cartoon_loop_quality [[ribbon_width]] <br /> cartoon_loop_radius robust_logs <br /> [[cartoon_nucleic_acid_color]] rock_delay <br /> [[cartoon_nucleic_acid_mode]] roving_byres <br /> [[cartoon_oval_length]] roving_cartoon <br /> [[cartoon_oval_quality]] roving_delay <br /> [[cartoon_oval_width]] roving_detail <br /> cartoon_power roving_isomesh <br /> cartoon_power_b roving_isosurface <br /> cartoon_putty_quality roving_labels <br /> cartoon_putty_radius roving_lines <br /> cartoon_putty_range roving_map1_level <br /> cartoon_putty_scale_max roving_map1_name <br /> cartoon_putty_scale_min roving_map2_level <br /> cartoon_putty_scale_power roving_map2_name <br /> [[cartoon_rect_length]] roving_map3_level <br /> [[cartoon_rect_width]] roving_map3_name <br /> cartoon_refine roving_nb_spheres <br /> cartoon_refine_normals roving_nonbonded <br /> cartoon_refine_tips roving_origin <br /> cartoon_ring_color roving_origin_z <br /> cartoon_ring_finder roving_origin_z_cushion <br /> [[cartoon_ring_mode]] roving_polar_contacts <br /> cartoon_ring_radius roving_polar_cutoff <br /> [[cartoon_ring_transparency]] roving_ribbon <br /> cartoon_ring_width roving_selection <br /> [[cartoon_round_helices]] roving_spheres <br /> [[cartoon_sampling]] roving_sticks <br /> [[cartoon_side_chain_helper]] scene_animation <br /> cartoon_smooth_cycles scene_animation_duration <br /> cartoon_smooth_first scene_current_name <br /> cartoon_smooth_last scene_loop <br /> [[cartoon_smooth_loops]] scene_restart_movie_delay <br /> cartoon_throw scenes_changed <br /> cartoon_trace_atoms sculpt_angl_weight <br /> [[cartoon_transparency]] sculpt_auto_center <br /> cartoon_tube_cap sculpt_avd_excl <br /> cartoon_tube_quality sculpt_avd_gap <br /> cartoon_tube_radius sculpt_avd_range <br /> [[cavity_cull]] sculpt_avd_weight <br /> cgo_dot_radius sculpt_bond_weight <br /> cgo_dot_width sculpt_field_mask <br /> cgo_line_radius sculpt_hb_overlap <br /> cgo_line_width sculpt_hb_overlap_base <br /> cgo_ray_width_scale sculpt_line_weight <br /> cgo_sphere_quality sculpt_max_max <br /> cgo_transparency sculpt_max_min <br /> clamp_colors sculpt_max_scale <br /> connect_bonded sculpt_max_weight <br /> connect_cutoff sculpt_memory <br /> connect_mode sculpt_min_max <br /> coulomb_cutoff sculpt_min_min <br /> coulomb_dielectric sculpt_min_scale <br /> coulomb_units_factor sculpt_min_weight <br /> cull_spheres sculpt_nb_interval <br /> [[Dash_Gap]] sculpt_plan_weight <br /> [[Dash_Length]] sculpt_pyra_weight <br /> [[Dash_Radius]] sculpt_tors_tolerance <br /> [[Dash_Round_Ends]] sculpt_tors_weight <br /> dash_width sculpt_tri_max <br /> debug_pick sculpt_tri_min <br /> defer_builds_mode sculpt_tri_mode <br /> defer_updates sculpt_tri_scale <br /> [[depth_cue]] sculpt_tri_weight <br /> dihedral_label_position sculpt_vdw_scale <br /> dihedral_size sculpt_vdw_scale14 <br /> direct sculpt_vdw_vis_max <br /> dist_counter sculpt_vdw_vis_mid <br /> distance_exclusion sculpt_vdw_vis_min <br /> dot_color sculpt_vdw_vis_mode <br /> dot_density sculpt_vdw_weight <br /> dot_hydrogens sculpt_vdw_weight14 <br /> dot_lighting sculpting <br /> dot_mode sculpting_cycles <br /> dot_normals secondary_structure <br /> [[dot_radius]] security <br /> dot_solvent sel_counter<br /> [[dot_width]] selection_overlay <br /> draw_frames selection_round_points <br /> editor_auto_dihedral selection_visible_only <br /> editor_auto_origin [[selection_width]] <br /> editor_label_fragments selection_width_max <br /> fast_idle selection_width_scale <br /> fetch_path [[seq_view]] <br /> [[Field_Of_View]] seq_view_alignment <br /> fit_iterations seq_view_color <br /> fit_tolerance seq_view_discrete_by_state <br /> float_labels seq_view_fill_char <br /> [[fog]] seq_view_fill_color <br /> [[fog_start]] seq_view_format <br /> frame seq_view_label_color <br /> full_screen seq_view_label_mode <br /> gamma seq_view_label_spacing <br /> gaussian_b_adjust seq_view_label_start <br /> gaussian_b_floor [[seq_view_location]] <br /> gaussian_resolution seq_view_overlay <br /> gl_ambient seq_view_unaligned_color <br /> h_bond_cone seq_view_unaligned_mode <br /> h_bond_cutoff_center session_file <br /> h_bond_cutoff_edge session_migration <br /> h_bond_exclusion session_version_check <br /> h_bond_max_angle [[shininess]]<br /> h_bond_power_a show_alpha_checker <br /> h_bond_power_b show_progress <br /> [[half_bonds]] simplify_display_lists <br /> hash_max single_image <br /> hide_underscore_names slice_dynamic_grid <br /> idle_delay slice_dynamic_grid_resolution<br /> ignore_case slice_grid <br /> ignore_pdb_segi slice_height_map <br /> image_dots_per_inch slice_height_scale <br /> internal_feedback slice_track_camera <br /> [[Internal Gui|internal_gui]] slow_idle <br /> internal_gui_control_size smooth_color_triangle <br /> internal_gui_mode solvent_radius <br /> internal_gui_width spec_count <br /> [[internal_prompt]] spec_direct <br /> isomesh_auto_state spec_direct_power <br /> [[label_color]] spec_power <br /> [[Label_font_id]] [[spec_reflect]] <br /> [[Label_outline_color]] specular <br /> [[label_position]] specular_intensity <br /> [[label_shadow_mode]] [[sphere_color]] <br /> [[label_size]] sphere_mode <br /> legacy_mouse_zoom sphere_point_max_size <br /> legacy_vdw_radii sphere_point_size <br /> light sphere_quality <br /> light2 [[sphere_scale]] <br /> light3 sphere_solvent <br /> light4 [[sphere_transparency]] <br /> light5 spheroid_fill <br /> light6 spheroid_scale <br /> light7 spheroid_smooth <br /> light8 ss_helix_phi_exclude <br /> light9 ss_helix_phi_include <br /> [[light_count]] ss_helix_phi_target <br /> line_radius ss_helix_psi_exclude <br /> [[line_smooth]] ss_helix_psi_include <br /> line_stick_helper ss_helix_psi_target <br /> line_width ss_strand_phi_exclude <br /> log_box_selections ss_strand_phi_include <br /> log_conformations ss_strand_phi_target <br /> logging ss_strand_psi_exclude <br /> matrix_mode ss_strand_psi_include <br /> max_threads ss_strand_psi_target <br /> max_triangles state <br /> [[mesh_color]] static_singletons <br /> [[mesh_lighting]] stereo <br /> [[mesh_mode]] stereo_angle <br /> mesh_normals stereo_double_pump_mono <br /> [[mesh_quality]] stereo_mode <br /> mesh_radius stereo_shift <br /> mesh_solvent [[stick_ball]] <br /> [[mesh_type]] [[stick_ball_ratio]] <br /> [[mesh_width]] stick_color <br /> [[min_mesh_spacing]] stick_fixed_radius <br /> mouse_limit [[stick_nub]] <br /> mouse_restart_movie_delay stick_overlap <br /> mouse_scale stick_quality <br /> mouse_selection_mode stick_radius <br /> movie_delay [[stick_transparency]] <br /> movie_loop stick_valence_scale <br /> multiplex stop_on_exceptions <br /> no_idle surface_best <br /> nonbonded_size surface_carve_cutoff <br /> normal_workaround surface_carve_selection <br /> normalize_ccp4_maps surface_carve_state <br /> normalize_grd_maps surface_circumscribe <br /> normalize_o_maps surface_clear_cutoff <br /> nvidia_bugs surface_clear_selection <br /> opaque_background surface_clear_state <br /> [[orthoscopic]] surface_color <br /> overlay surface_debug <br /> overlay_lines surface_miserable <br /> pdb_conect_all surface_mode <br /> pdb_discrete_chains surface_normal <br /> pdb_echo_tags surface_optimize_subsets <br /> pdb_hetatm_sort surface_poor <br /> pdb_honor_model_number surface_proximity <br /> pdb_insertions_go_first surface_quality <br /> pdb_insure_orthogonal surface_ramp_above_mode <br /> pdb_literal_names surface_solvent <br /> pdb_no_end_record surface_trim_cutoff <br /> pdb_reformat_names_mode surface_trim_factor <br /> pdb_retain_ids surface_type <br /> pdb_standard_order suspend_updates <br /> pdb_truncate_residue_name swap_dsn6_bytes <br /> pdb_unbond_cations sweep_angle <br /> pdb_use_ter_records sweep_mode <br /> [[pickable]] sweep_phase <br /> png_file_gamma sweep_speed <br /> png_screen_gamma test1 <br /> power test2 <br /> pqr_no_chain_id text <br /> presentation texture_fonts <br /> presentation_auto_quit [[transparency]] <br /> presentation_auto_start transparency_mode <br /> presentation_mode transparency_picking_mode <br /> preserve_chempy_ids triangle_max_passes <br /> pymol_space_max_blue trim_dots <br /> pymol_space_max_green [[two_sided_lighting]]<br /> pymol_space_max_red use_display_lists <br /> pymol_space_min_factor [[valence]] <br /> raise_exceptions valence_default <br /> rank_assisted_sorts valence_size <br /> ray_blend_blue validate_object_names <br /> ray_blend_colors [[virtual_trackball]] <br /> ray_blend_green wildcard <br /> ray_blend_red wizard_prompt_mode <br /> ray_color_ramps wrap_output <br /> <br /> [[Category:Settings|All Settings]]</div>

Esbenjannik https://wiki.pymol.org/index.php?title=Label_position&diff=6233 2006-12-06T13:21:19Z

<p>Esbenjannik: </p> <hr /> <div>label_position sets the offset of the label relative to the atomic position.<br /> <br /> example:<br /> set label_position,(3,2,1)<br /> <br /> Offsets the labels 3 aangstrom(?) in X, 2 in Y and 1 in Z, relative to the viewport. Can be usefull if spheres needs labeling</div>

Esbenjannik https://wiki.pymol.org/index.php?title=Settings&diff=10134 2006-12-06T13:17:00Z

<p>Esbenjannik: </p> <hr /> <div>These are all the PyMol settings. If you feel like documenting them, and what they do, feel free. 42 done, 476 to go !<br /> <br /> active_selections ray_default_renderer <br /> [[all_states]] ray_direct_shade <br /> [[ambient]] ray_hint_camera <br /> angle_label_position ray_hint_shadow <br /> angle_size ray_improve_shadows <br /> animation ray_interior_color <br /> animation_duration ray_interior_mode <br /> [[antialias]] ray_interior_reflect <br /> async_builds ray_interior_shadows <br /> atom_name_wildcard ray_interior_texture <br /> auto_classify_atoms ray_legacy_lighting <br /> auto_color ray_max_passes <br /> auto_dss [[ray_opaque_background]] <br /> auto_hide_selections [[ray_orthoscopic]] <br /> auto_indicate_flags ray_oversample_cutoff <br /> auto_number_selections ray_pixel_scale <br /> auto_remove_hydrogens [[ray_shadow]] <br /> auto_sculpt ray_shadow_decay_factor <br /> auto_show_lines ray_shadow_decay_range <br /> auto_show_nonbonded ray_shadow_fudge <br /> auto_show_selections [[ray_shadows]] <br /> auto_show_spheres ray_texture <br /> [[auto_zoom]] ray_texture_settings <br /> [[backface_cull]] ray_trace_depth_factor <br /> batch_prefix ray_trace_disco_factor <br /> [[bg_rgb]] [[ray_trace_fog]] <br /> bonding_vdw_cutoff ray_trace_fog_start <br /> button_mode [[ray_trace_frames]] <br /> button_mode_name ray_trace_gain <br /> cache_display ray_trace_mode <br /> cache_frames ray_trace_slope_factor <br /> cache_memory ray_transparency_contrast <br /> [[cartoon_color]] ray_transparency_shadows <br /> [[Cartoon Helix Settings|cartoon_cylindrical_helices]] ray_transparency_spec_cut <br /> cartoon_debug ray_transparency_specular <br /> [[cartoon_discrete_colors]] ray_triangle_fudge <br /> [[cartoon_dumbbell_length]] [[reflect]] <br /> [[cartoon_dumbbell_radius]] reflect_power <br /> [[cartoon_dumbbell_width]] retain_order <br /> [[Cartoon Helix Settings|cartoon_fancy_helices]] [[ribbon_color]] <br /> [[cartoon_fancy_sheets]] ribbon_nucleic_acid_mode <br /> [[cartoon_flat_cycles]] ribbon_power <br /> [[cartoon_flat_sheets]] ribbon_power_b <br /> [[Cartoon_helix_radius]] ribbon_radius <br /> [[cartoon_highlight_color]] [[ribbon_sampling]] <br /> cartoon_ladder_color ribbon_side_chain_helper <br /> cartoon_ladder_mode ribbon_smooth <br /> cartoon_ladder_radius ribbon_throw <br /> cartoon_loop_cap ribbon_trace_atoms <br /> cartoon_loop_quality [[ribbon_width]] <br /> cartoon_loop_radius robust_logs <br /> [[cartoon_nucleic_acid_color]] rock_delay <br /> [[cartoon_nucleic_acid_mode]] roving_byres <br /> [[cartoon_oval_length]] roving_cartoon <br /> [[cartoon_oval_quality]] roving_delay <br /> [[cartoon_oval_width]] roving_detail <br /> cartoon_power roving_isomesh <br /> cartoon_power_b roving_isosurface <br /> cartoon_putty_quality roving_labels <br /> cartoon_putty_radius roving_lines <br /> cartoon_putty_range roving_map1_level <br /> cartoon_putty_scale_max roving_map1_name <br /> cartoon_putty_scale_min roving_map2_level <br /> cartoon_putty_scale_power roving_map2_name <br /> [[cartoon_rect_length]] roving_map3_level <br /> [[cartoon_rect_width]] roving_map3_name <br /> cartoon_refine roving_nb_spheres <br /> cartoon_refine_normals roving_nonbonded <br /> cartoon_refine_tips roving_origin <br /> cartoon_ring_color roving_origin_z <br /> cartoon_ring_finder roving_origin_z_cushion <br /> [[cartoon_ring_mode]] roving_polar_contacts <br /> cartoon_ring_radius roving_polar_cutoff <br /> [[cartoon_ring_transparency]] roving_ribbon <br /> cartoon_ring_width roving_selection <br /> [[cartoon_round_helices]] roving_spheres <br /> [[cartoon_sampling]] roving_sticks <br /> [[cartoon_side_chain_helper]] scene_animation <br /> cartoon_smooth_cycles scene_animation_duration <br /> cartoon_smooth_first scene_current_name <br /> cartoon_smooth_last scene_loop <br /> [[cartoon_smooth_loops]] scene_restart_movie_delay <br /> cartoon_throw scenes_changed <br /> cartoon_trace_atoms sculpt_angl_weight <br /> [[cartoon_transparency]] sculpt_auto_center <br /> cartoon_tube_cap sculpt_avd_excl <br /> cartoon_tube_quality sculpt_avd_gap <br /> cartoon_tube_radius sculpt_avd_range <br /> [[cavity_cull]] sculpt_avd_weight <br /> cgo_dot_radius sculpt_bond_weight <br /> cgo_dot_width sculpt_field_mask <br /> cgo_line_radius sculpt_hb_overlap <br /> cgo_line_width sculpt_hb_overlap_base <br /> cgo_ray_width_scale sculpt_line_weight <br /> cgo_sphere_quality sculpt_max_max <br /> cgo_transparency sculpt_max_min <br /> clamp_colors sculpt_max_scale <br /> connect_bonded sculpt_max_weight <br /> connect_cutoff sculpt_memory <br /> connect_mode sculpt_min_max <br /> coulomb_cutoff sculpt_min_min <br /> coulomb_dielectric sculpt_min_scale <br /> coulomb_units_factor sculpt_min_weight <br /> cull_spheres sculpt_nb_interval <br /> [[Dash_Gap]] sculpt_plan_weight <br /> [[Dash_Length]] sculpt_pyra_weight <br /> [[Dash_Radius]] sculpt_tors_tolerance <br /> [[Dash_Round_Ends]] sculpt_tors_weight <br /> dash_width sculpt_tri_max <br /> debug_pick sculpt_tri_min <br /> defer_builds_mode sculpt_tri_mode <br /> defer_updates sculpt_tri_scale <br /> depth_cue sculpt_tri_weight <br /> dihedral_label_position sculpt_vdw_scale <br /> dihedral_size sculpt_vdw_scale14 <br /> direct sculpt_vdw_vis_max <br /> dist_counter sculpt_vdw_vis_mid <br /> distance_exclusion sculpt_vdw_vis_min <br /> dot_color sculpt_vdw_vis_mode <br /> dot_density sculpt_vdw_weight <br /> dot_hydrogens sculpt_vdw_weight14 <br /> dot_lighting sculpting <br /> dot_mode sculpting_cycles <br /> dot_normals secondary_structure <br /> dot_radius security <br /> dot_solvent sel_counter<br /> [[dot_width]] selection_overlay <br /> draw_frames selection_round_points <br /> editor_auto_dihedral selection_visible_only <br /> editor_auto_origin [[selection_width]] <br /> editor_label_fragments selection_width_max <br /> fast_idle selection_width_scale <br /> fetch_path [[seq_view]] <br /> [[Field_Of_View]] seq_view_alignment <br /> fit_iterations seq_view_color <br /> fit_tolerance seq_view_discrete_by_state <br /> float_labels seq_view_fill_char <br /> [[fog]] seq_view_fill_color <br /> [[fog_start]] seq_view_format <br /> frame seq_view_label_color <br /> full_screen seq_view_label_mode <br /> gamma seq_view_label_spacing <br /> gaussian_b_adjust seq_view_label_start <br /> gaussian_b_floor [[seq_view_location]] <br /> gaussian_resolution seq_view_overlay <br /> gl_ambient seq_view_unaligned_color <br /> h_bond_cone seq_view_unaligned_mode <br /> h_bond_cutoff_center session_file <br /> h_bond_cutoff_edge session_migration <br /> h_bond_exclusion session_version_check <br /> h_bond_max_angle [[shininess]]<br /> h_bond_power_a show_alpha_checker <br /> h_bond_power_b show_progress <br /> [[half_bonds]] simplify_display_lists <br /> hash_max single_image <br /> hide_underscore_names slice_dynamic_grid <br /> idle_delay slice_dynamic_grid_resolution<br /> ignore_case slice_grid <br /> ignore_pdb_segi slice_height_map <br /> image_dots_per_inch slice_height_scale <br /> internal_feedback slice_track_camera <br /> [[Internal Gui|internal_gui]] slow_idle <br /> internal_gui_control_size smooth_color_triangle <br /> internal_gui_mode solvent_radius <br /> internal_gui_width spec_count <br /> [[internal_prompt]] spec_direct <br /> isomesh_auto_state spec_direct_power <br /> [[label_color]] spec_power <br /> [[Label_font_id]] [[spec_reflect]] <br /> [[Label_outline_color]] specular <br /> [[label_position]] specular_intensity <br /> [[label_shadow_mode]] [[sphere_color]] <br /> [[label_size]] sphere_mode <br /> legacy_mouse_zoom sphere_point_max_size <br /> legacy_vdw_radii sphere_point_size <br /> light sphere_quality <br /> light2 [[sphere_scale]] <br /> light3 sphere_solvent <br /> light4 [[sphere_transparency]] <br /> light5 spheroid_fill <br /> light6 spheroid_scale <br /> light7 spheroid_smooth <br /> light8 ss_helix_phi_exclude <br /> light9 ss_helix_phi_include <br /> [[light_count]] ss_helix_phi_target <br /> line_radius ss_helix_psi_exclude <br /> [[line_smooth]] ss_helix_psi_include <br /> line_stick_helper ss_helix_psi_target <br /> line_width ss_strand_phi_exclude <br /> log_box_selections ss_strand_phi_include <br /> log_conformations ss_strand_phi_target <br /> logging ss_strand_psi_exclude <br /> matrix_mode ss_strand_psi_include <br /> max_threads ss_strand_psi_target <br /> max_triangles state <br /> [[mesh_color]] static_singletons <br /> [[mesh_lighting]] stereo <br /> [[mesh_mode]] stereo_angle <br /> mesh_normals stereo_double_pump_mono <br /> [[mesh_quality]] stereo_mode <br /> mesh_radius stereo_shift <br /> mesh_solvent [[stick_ball]] <br /> [[mesh_type]] [[stick_ball_ratio]] <br /> [[mesh_width]] stick_color <br /> [[min_mesh_spacing]] stick_fixed_radius <br /> mouse_limit [[stick_nub]] <br /> mouse_restart_movie_delay stick_overlap <br /> mouse_scale stick_quality <br /> mouse_selection_mode stick_radius <br /> movie_delay [[stick_transparency]] <br /> movie_loop stick_valence_scale <br /> multiplex stop_on_exceptions <br /> no_idle surface_best <br /> nonbonded_size surface_carve_cutoff <br /> normal_workaround surface_carve_selection <br /> normalize_ccp4_maps surface_carve_state <br /> normalize_grd_maps surface_circumscribe <br /> normalize_o_maps surface_clear_cutoff <br /> nvidia_bugs surface_clear_selection <br /> opaque_background surface_clear_state <br /> [[orthoscopic]] surface_color <br /> overlay surface_debug <br /> overlay_lines surface_miserable <br /> pdb_conect_all surface_mode <br /> pdb_discrete_chains surface_normal <br /> pdb_echo_tags surface_optimize_subsets <br /> pdb_hetatm_sort surface_poor <br /> pdb_honor_model_number surface_proximity <br /> pdb_insertions_go_first surface_quality <br /> pdb_insure_orthogonal surface_ramp_above_mode <br /> pdb_literal_names surface_solvent <br /> pdb_no_end_record surface_trim_cutoff <br /> pdb_reformat_names_mode surface_trim_factor <br /> pdb_retain_ids surface_type <br /> pdb_standard_order suspend_updates <br /> pdb_truncate_residue_name swap_dsn6_bytes <br /> pdb_unbond_cations sweep_angle <br /> pdb_use_ter_records sweep_mode <br /> [[pickable]] sweep_phase <br /> png_file_gamma sweep_speed <br /> png_screen_gamma test1 <br /> power test2 <br /> pqr_no_chain_id text <br /> presentation texture_fonts <br /> presentation_auto_quit [[transparency]] <br /> presentation_auto_start transparency_mode <br /> presentation_mode transparency_picking_mode <br /> preserve_chempy_ids triangle_max_passes <br /> pymol_space_max_blue trim_dots <br /> pymol_space_max_green [[two_sided_lighting]]<br /> pymol_space_max_red use_display_lists <br /> pymol_space_min_factor [[valence]] <br /> raise_exceptions valence_default <br /> rank_assisted_sorts valence_size <br /> ray_blend_blue validate_object_names <br /> ray_blend_colors virtual_trackball <br /> ray_blend_green wildcard <br /> ray_blend_red wizard_prompt_mode <br /> ray_color_ramps wrap_output <br /> <br /> [[Category:Settings|All Settings]]</div>

Esbenjannik