PyMOL Wiki - User contributions [en]

File:MuraEtAl PLoS BiomolGraphics SuppFigS3 01nov2011 erratum.pdf

2011-11-01T21:12:41Z

Cmura: uploaded a new version of "File:MuraEtAl PLoS BiomolGraphics SuppFigS3 01nov2011 erratum.pdf"

updated version of Fig S3b,c and legend

File:MuraEtAl PLoS BiomolGraphics SuppFigS3 01nov2011 erratum.pdf

2011-11-01T21:09:16Z

Cmura: updated version of Fig S3b,c and legend

updated version of Fig S3b,c and legend

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2011-11-01T20:51:09Z

Cmura: Created page with "<div style="padding-top:10px;"></div>"

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2011-11-01T20:49:01Z

Cmura: Created page with "<div style="padding-top:10px;"></div>"

File:PLoS BiomolGraph 2010 InputFiles.tar.bz2

2011-01-03T20:30:04Z

Cmura:

User:Cmura

2010-01-13T01:18:20Z

Cmura:

Warren

2009-11-10T18:29:15Z

Cmura: /* Additional Photos */

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Additional Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|none|thumb|Warren DeLano, rendered as a mosaic of PyMOL-crafted [[Covers|journal covers]] ]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

Warren

2009-11-10T18:28:54Z

Cmura: /* Additional Photos */

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Additional Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|none|thumb|Warren DeLano, rendered as a mosaic of PyMOL-crafted journal [[Covers]] ]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

Warren

2009-11-10T18:11:05Z

Cmura:

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Additional Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|none|thumb|Warren DeLano, rendered as a mosaic of PyMOL-crafted journal covers]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

Warren

2009-11-10T18:10:42Z

Cmura:

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|none|thumb|Warren DeLano, rendered as a mosaic of PyMOL-crafted journal covers]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

Warren

2009-11-10T18:10:17Z

Cmura: /* Photos */

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|left|thumb|Warren DeLano, rendered as a mosaic of PyMOL-crafted journal covers]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

Warren

2009-11-10T18:09:59Z

Cmura: /* Photos */

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|left|thumb|Warren DeLano, rendered as a mosaic of PyMOL-crafted [Covers|journal covers]]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

Warren

2009-11-10T18:08:54Z

Cmura:

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|left|thumb|Warren DeLano, rendered as a mosaic of PyMOL-crafted journal covers]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

Warren

2009-11-10T18:08:23Z

Cmura:

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|left|frame|thumb|Warren DeLano, rendered as a mosaic of PyMOL-crafted journal covers]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

Warren

2009-11-10T18:07:08Z

Cmura:

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|left|frame|Warren DeLano, rendered as a mosaic of PyMOL-crafted journal covers]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

File:WarrenDeLanoMosaicized 1536x1152.png

2009-11-10T18:06:20Z

Cmura:

Warren

2009-11-10T18:05:55Z

Cmura:

= Warren DeLano =
Sadly, Waren DeLano, the author of PyMOL, passed away on Monday night, Nov. 2nd, 2009. He will be sorely missed.

Here is the note posted to the CCP4 list by his mentor, Axel Brunger.
----
Dear CCP4 Community:
[[Image:Warren.jpg|right|frame|Warren DeLano]]

I write today with very sad news about Dr. Warren Lyford DeLano.

I was informed by his family today that Warren suddenly passed
away at home on Tuesday morning, November 3rd.

While at Yale, Warren made countless contributions to the computational tools
and methods developed in my laboratory (the X-PLOR and CNS programs),
including the direct rotation function, the first prediction of helical coiled coil
structures, the scripting and parsing tools that made CNS a universal computational
crystallography program.

He then joined Dr. Jim Wells laboratory at USCF and Genentech where he pursued
a Ph.D. in biophysics, discovering some of the principles that govern
protein-protein interactions.

Warren then made a fundamental contribution to biological sciences by creating the
Open Source molecular graphics program PyMOL that is widely used throughout
the world. Nearly all publications that display macromolecular structures use PyMOL.

Warren was a strong advocate of freely available software and the Open Source
movement.

Warren's family is planning to announce a memorial service, but arrangements have
not yet been made. I will send more information as I receive it.

Please join me in extending our condolences to Warren's family.

Sincerely yours,
Axel Brunger

Axel T. Brunger
Investigator, Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

= Links =
* Post a message of your memories of Warren on [http://warrendelano.blogspot.com/ this blog] that his family set up.
* [http://www.flickr.com/photos/chemlove519/4088244149/in/set-72157622633960867/ Pics of Warren]
* In lieu of flowers please make donations to [http://warrendelano.blogspot.com/2009/11/updates.html the Warren L. DeLano Memorial Fund].

= Photos =
[[Image:WarrenDeLanoMosaicized_1536x1152.png|Warren DeLano, rendered as a mosaic of PyMOL-crafted journal covers]]

= User Comments =
If anyone would like, please feel fee to add any comments/memories you have, here.

----
* I am very saddened to have lost a friend and mentor. Warren was a great influence on us all.
::[[User:Inchoate|Tree]] 19:45, 8 November 2009 (UTC)
----
* I have been in utter disbelief over the past week. His love for science was clear and his mission to make PyMOL the best that it could be was unparalleled. I wish I had the opportunity to meet him in person.
::[[User:slaw|slaw]] 11:38, 9 Novermber 2009 (EST)
----

Covers

2009-11-10T04:53:34Z

Cmura:

= PyMOL-created Journal Covers =
Part of PyMOL's popularity comes from the fact that it is very flexible and it offers arbitrarily high-resolution images as output; this make it a great tool for making journal covers or any press-related images.

Here are some of the known PyMOL-created Journal Covers. There are surely more out there. If you have a cover you'd like to add, feel free.

<gallery perrow="5">
Image:Image_large.png |[http://pymolwiki.org/index.php/File:Image_large.png MD simulation of protein-protein binding ]'''Pymol generated Movie is avialable inside pdf'''[[http://www.pymolwiki.org/index.php/File:SH3.pdf]] ''' or high quality AVI format'''[http://gepard.bioinformatik.uni-saarland.de/old_html/material/dl/SH3_large.avi]
Image:Cover_JCIM_2008_48-10.png|[http://pubs.acs.org/action/showLargeCover?issue=329743592 J. Chem. Inf. Model., 2008, 48 (10)]
Image:Science090410.jpg|[http://www.sciencemag.org/content/vol324/issue5924/index.dtl Protein Dynamics]
Image:080701_h.a.steinberg_biochemie.jpg|'''Targeting DNA''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236236%232008%23999099992%23693363%23FLA%23&_cdi=6236&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=3e9cfd266720a7645cec65b2bfbd7645 BIOCHEMIE], July 1, 2008 Cover, Vol. 90.
Image:080602cnen.pdf.jpg|'''Harnessing Helices''', [http://pubs.acs.org/cen/coverstory/86/8622aboutcover.html Chemical & Engineering News], June 2, 2008 Cover, Vol. 86, Issue 22.
Image:080118_h.a.steinberg_JBC.jpg|''' Fusarium head blight (FHB)''', [http://www.jbc.org/content/vol283/issue3/cover.shtml JBC], January 18, 2008 Cover, Vol. 283, Issue 3.
Image:071213nature.pdf.jpg|'''Pumping Ions''', [http://www.nature.com/nature/journal/v450/n7172/index.html Nature], Dec. 13th, 2007.
Image:0712channels.jpg|[http://www.landesbioscience.com/journals/channels/toc/1/6], Dec 2007.
Image:071123science.pdf.jpg|[http://www.sciencemag.org/content/vol318/issue5854/index.dtl Science], Nov. 23rd, 2007.
Image:071120pnas.jpg|'''Sensing Calciums'''[http://www.pnas.org/content/104/47.toc], Nov 20th, 2007.
Image:071113Structure.png|'''Aminoacyl-tRNA synthetases from human mitochondria'''[http://www.cell.com/structure/issue?pii=S0969-2126(07)X0180-1], Nov. 13th, 2007.
Image:071009science.pdf.jpg|[http://www.sciencemag.org/content/vol318/issue5849/index.dtl Science], Oct. 19th, 2007.
Image:070920nature.pdf.jpg|'''Sensing Acid''', [http://www.nature.com/nature/journal/v449/n7160/index.html Nature], Sept. 20th, 2007.
Image:070816nature.pdf.jpg|'''Form Finds Function?''', [http://www.nature.com/nature/journal/v448/n7155/index.html Nature], Aug. 16thm 2007.
Image:Largecover.gif|[http://www.nature.com/neuro/journal/v10/n8/abs/nn1942.html Nature Neuroscience] Vol. 10 No. 8 Aug. 2007
Image:070803_h.a.steinberg_molec_cell.jpg|'''Paused transcription complexes''', [http://www.cell.com/molecular-cell/issue?pii=S1097-2765(07)X0175-8# Molecular Cell], August 3 2007 Cover, Vol. 27, Issue 3.
Image:070415.h.a.steinberg_ABB.jpg|'''Vitamin D''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_cdi=6701&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=b9733feacdee17300b6b31649737997b&jchunk=460#460 ABB], April 14 2007 Cover, Vol. 460, Issue 2.
Image:070405nature.pdf.jpg|'''Auxin Action Revealed''', [http://www.nature.com/nature/journal/v446/n7136/index.html Nature], April 5, 2007.
Image:070301_h.a.steinberg_protein_science.jpg|'''Glucose-1-phosphate uridylyltransferase''', [http://www.proteinscience.org/content/vol16/issue3/cover.shtml Protein Science], March 3, 2007 Cover, Volume 16 Issue 3.
Image:070219cnen.pdf.jpg|'''How Ribosomes Work''', [http://pubs.acs.org/cen/coverstory/85/8508aboutcover.html Chemical & Engineering News], Feb. 19th, 2007.
Image:070215nature.pdf.jpg|'''HIV's Hidden Weakness''', [http://www.nature.com/nature/journal/v445/n7129/index.html Nature], Feb. 15th, 2007.
Image:061208_h.a.steinberg_molec_cell.jpg|'''Sen1 Control of RNA Pol II Termination''', [http://www.molecule.org/content/issue?volume=24&issue=5 Molecular Cell], December 8, 2006 Cover, Volume 24 Issue 5.
Image:061201_h.a.steinberg_molec_micro.jpg|'''Transposon Loops''', [http://www.blackwell-synergy.com/toc/mmi/62/6 Molecular Microbiology], December 1, 2006 Cover, Volume 62 Issue 6.
Image:060904cnen.pdf.jpg|'''Glycosylation Engineering''', [http://pubs.acs.org/subscribe/journals/cen/84/i36/toc/toc_i36.html Chemical & Engineering News], Sept. 4th, 2006.
Image:060817nature.pdf.jpg|'''Chromatin Code Decoded''', [http://www.nature.com/nature/journal/v442/n7104/index.html Nature], Aug. 17th, 2006.
Image:060522cnen.pdf.jpg|'''Halogenases''', [http://pubs.acs.org/subscribe/journals/cen/84/i21/toc/toc_i21.html Chemical & Engineering News], May 22nd, 2006.
Image:060101_h.a.steinberg_protein_science.jpg|'''Poly (2S-proline)''', [http://www.proteinscience.org/content/vol15/issue1/cover.shtml Protein Science], January 1, 2006 Cover, Volume 15, Issue 1.
Image:050624_h.a.steinberg_JMB.jpg|'''Ribonuclease A''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236899%232005%23996459998%23609160%23FLA%23&_cdi=6899&_pubType=J&view=c&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=9623405850d13617453adb034fb10a81 JMB], November 18, 2005 Cover, Volume 354, Issue 1.
Image:051020nature.pdf.jpg|'''The B to Z of DNA''', [http://www.nature.com/nature/journal/v437/n7062/index.html Nature], Oct. 20th, 2005.

Image:050923_h.a.steinberg_JBC.jpg|'''GalNAc kinase''', [http://www.jbc.org/content/vol280/issue38/cover.shtml JBC], September 23, 2005 Cover, Volume 280, Issue 38.
Image:050908nature.pdf.jpg|'''Neurotransmission''', [http://www.nature.com/nature/journal/v437/n7056/index.html Nature], Sept. 8th, 2005.
Image:050722science.pdf.jpg|[http://www.sciencemag.org/content/vol309/issue5734/index.dtl Science], July 22nd, 2005.
Image:050624_h.a.steinberg_jmb1.jpg|[http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236899%232005%23996509994%23597371%23FLA%23&_cdi=6899&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=0bc37bcef231976694d0fbe8920ef596 JMB], June 24, 2005 Cover, Volume 349, Issue 5.
Image:050609nature.pdf.jpg|'''Probing Prions''', [http://www.nature.com/nature/journal/v435/n7043/index.html Nature], June 9th, 2005.
Image:050429science.pdf.jpg|[http://www.sciencemag.org/content/vol308/issue5722/index.dtl Science], April 29th, 2005.
Image:040910science.pdf.jpg|[http://www.sciencemag.org/content/vol305/issue5690/index.dtl Science], Sept., 10th, 2004.
Image:040123science.pdf.jpg|[http://www.sciencemag.org/content/vol303/issue5657/index.dtl Science], Jan. 23rd, 2004.
Image:apr2003_ProtSci.png|<b>''Pae'' SmAP1</b> 14-mers, [http://www3.interscience.wiley.com/journal/121602086/issue ''Protein Science'', April 2003].
Image:Ribbon_hh1.png|[http://www.chembiol.com/content/issue?volume=15&issue=4 Chem. Biol.]
Image:0903_1_1.jpg|[http://pubs.acs.org/journals/achre4/covers/36/articleWindow.achre4.091603.html Accounts of Chemical Research]
</gallery>

Covers

2009-11-10T04:52:51Z

Cmura:

= PyMOL-created Journal Covers =
Part of PyMOL's popularity comes from the fact that it is very flexible and it offers arbitrarily high-resolution images as output; this make it a great tool for making journal covers or any press-related images.

Here are some of the known PyMOL-created Journal Covers. There are surely more out there. If you have a cover you'd like to add, feel free.

<gallery perrow="5">
Image:Image_large.png |[http://pymolwiki.org/index.php/File:Image_large.png MD simulation of protein-protein binding ]'''Pymol generated Movie is avialable inside pdf'''[[http://www.pymolwiki.org/index.php/File:SH3.pdf]] ''' or high quality AVI format'''[http://gepard.bioinformatik.uni-saarland.de/old_html/material/dl/SH3_large.avi]
Image:Cover_JCIM_2008_48-10.png|[http://pubs.acs.org/action/showLargeCover?issue=329743592 J. Chem. Inf. Model., 2008, 48 (10)]
Image:Science090410.jpg|[http://www.sciencemag.org/content/vol324/issue5924/index.dtl Protein Dynamics]
Image:080701_h.a.steinberg_biochemie.jpg|'''Targeting DNA''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236236%232008%23999099992%23693363%23FLA%23&_cdi=6236&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=3e9cfd266720a7645cec65b2bfbd7645 BIOCHEMIE], July 1, 2008 Cover, Vol. 90.
Image:080602cnen.pdf.jpg|'''Harnessing Helices''', [http://pubs.acs.org/cen/coverstory/86/8622aboutcover.html Chemical & Engineering News], June 2, 2008 Cover, Vol. 86, Issue 22.
Image:080118_h.a.steinberg_JBC.jpg|''' Fusarium head blight (FHB)''', [http://www.jbc.org/content/vol283/issue3/cover.shtml JBC], January 18, 2008 Cover, Vol. 283, Issue 3.
Image:071213nature.pdf.jpg|'''Pumping Ions''', [http://www.nature.com/nature/journal/v450/n7172/index.html Nature], Dec. 13th, 2007.
Image:0712channels.jpg|[http://www.landesbioscience.com/journals/channels/toc/1/6], Dec 2007.
Image:071123science.pdf.jpg|[http://www.sciencemag.org/content/vol318/issue5854/index.dtl Science], Nov. 23rd, 2007.
Image:071120pnas.jpg|'''Sensing Calciums'''[http://www.pnas.org/content/104/47.toc], Nov 20th, 2007.
Image:071113Structure.png|'''Aminoacyl-tRNA synthetases from human mitochondria'''[http://www.cell.com/structure/issue?pii=S0969-2126(07)X0180-1], Nov. 13th, 2007.
Image:071009science.pdf.jpg|[http://www.sciencemag.org/content/vol318/issue5849/index.dtl Science], Oct. 19th, 2007.
Image:070920nature.pdf.jpg|'''Sensing Acid''', [http://www.nature.com/nature/journal/v449/n7160/index.html Nature], Sept. 20th, 2007.
Image:070816nature.pdf.jpg|'''Form Finds Function?''', [http://www.nature.com/nature/journal/v448/n7155/index.html Nature], Aug. 16thm 2007.
Image:Largecover.gif|[http://www.nature.com/neuro/journal/v10/n8/abs/nn1942.html Nature Neuroscience] Vol. 10 No. 8 Aug. 2007
Image:070803_h.a.steinberg_molec_cell.jpg|'''Paused transcription complexes''', [http://www.cell.com/molecular-cell/issue?pii=S1097-2765(07)X0175-8# Molecular Cell], August 3 2007 Cover, Vol. 27, Issue 3.
Image:070415.h.a.steinberg_ABB.jpg|'''Vitamin D''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_cdi=6701&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=b9733feacdee17300b6b31649737997b&jchunk=460#460 ABB], April 14 2007 Cover, Vol. 460, Issue 2.
Image:070405nature.pdf.jpg|'''Auxin Action Revealed''', [http://www.nature.com/nature/journal/v446/n7136/index.html Nature], April 5, 2007.
Image:070301_h.a.steinberg_protein_science.jpg|'''Glucose-1-phosphate uridylyltransferase''', [http://www.proteinscience.org/content/vol16/issue3/cover.shtml Protein Science], March 3, 2007 Cover, Volume 16 Issue 3.
Image:070219cnen.pdf.jpg|'''How Ribosomes Work''', [http://pubs.acs.org/cen/coverstory/85/8508aboutcover.html Chemical & Engineering News], Feb. 19th, 2007.
Image:070215nature.pdf.jpg|'''HIV's Hidden Weakness''', [http://www.nature.com/nature/journal/v445/n7129/index.html Nature], Feb. 15th, 2007.
Image:061208_h.a.steinberg_molec_cell.jpg|'''Sen1 Control of RNA Pol II Termination''', [http://www.molecule.org/content/issue?volume=24&issue=5 Molecular Cell], December 8, 2006 Cover, Volume 24 Issue 5.
Image:061201_h.a.steinberg_molec_micro.jpg|'''Transposon Loops''', [http://www.blackwell-synergy.com/toc/mmi/62/6 Molecular Microbiology], December 1, 2006 Cover, Volume 62 Issue 6.
Image:060904cnen.pdf.jpg|'''Glycosylation Engineering''', [http://pubs.acs.org/subscribe/journals/cen/84/i36/toc/toc_i36.html Chemical & Engineering News], Sept. 4th, 2006.
Image:060817nature.pdf.jpg|'''Chromatin Code Decoded''', [http://www.nature.com/nature/journal/v442/n7104/index.html Nature], Aug. 17th, 2006.
Image:060522cnen.pdf.jpg|'''Halogenases''', [http://pubs.acs.org/subscribe/journals/cen/84/i21/toc/toc_i21.html Chemical & Engineering News], May 22nd, 2006.
Image:060101_h.a.steinberg_protein_science.jpg|'''Poly (2S-proline)''', [http://www.proteinscience.org/content/vol15/issue1/cover.shtml Protein Science], January 1, 2006 Cover, Volume 15, Issue 1.
Image:050624_h.a.steinberg_JMB.jpg|'''Ribonuclease A''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236899%232005%23996459998%23609160%23FLA%23&_cdi=6899&_pubType=J&view=c&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=9623405850d13617453adb034fb10a81 JMB], November 18, 2005 Cover, Volume 354, Issue 1.
Image:051020nature.pdf.jpg|'''The B to Z of DNA''', [http://www.nature.com/nature/journal/v437/n7062/index.html Nature], Oct. 20th, 2005.

Image:050923_h.a.steinberg_JBC.jpg|'''GalNAc kinase''', [http://www.jbc.org/content/vol280/issue38/cover.shtml JBC], September 23, 2005 Cover, Volume 280, Issue 38.
Image:050908nature.pdf.jpg|'''Neurotransmission''', [http://www.nature.com/nature/journal/v437/n7056/index.html Nature], Sept. 8th, 2005.
Image:050722science.pdf.jpg|[http://www.sciencemag.org/content/vol309/issue5734/index.dtl Science], July 22nd, 2005.
Image:050624_h.a.steinberg_jmb1.jpg|[http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236899%232005%23996509994%23597371%23FLA%23&_cdi=6899&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=0bc37bcef231976694d0fbe8920ef596 JMB], June 24, 2005 Cover, Volume 349, Issue 5.
Image:050609nature.pdf.jpg|'''Probing Prions''', [http://www.nature.com/nature/journal/v435/n7043/index.html Nature], June 9th, 2005.
Image:050429science.pdf.jpg|[http://www.sciencemag.org/content/vol308/issue5722/index.dtl Science], April 29th, 2005.
Image:040910science.pdf.jpg|[http://www.sciencemag.org/content/vol305/issue5690/index.dtl Science], Sept., 10th, 2004.
Image:040123science.pdf.jpg|[http://www.sciencemag.org/content/vol303/issue5657/index.dtl Science], Jan. 23rd, 2004.
Image:apr2003_ProtSci.png|<b>''Pae'' SmAP1 14-mers</b>, [http://www3.interscience.wiley.com/journal/121602086/issue ''Protein Science'', Apr-2003].
Image:Ribbon_hh1.png|[http://www.chembiol.com/content/issue?volume=15&issue=4 Chem. Biol.]
Image:0903_1_1.jpg|[http://pubs.acs.org/journals/achre4/covers/36/articleWindow.achre4.091603.html Accounts of Chemical Research]
</gallery>

Covers

2009-11-10T04:52:07Z

Cmura:

= PyMOL-created Journal Covers =
Part of PyMOL's popularity comes from the fact that it is very flexible and it offers arbitrarily high-resolution images as output; this make it a great tool for making journal covers or any press-related images.

Here are some of the known PyMOL-created Journal Covers. There are surely more out there. If you have a cover you'd like to add, feel free.

<gallery perrow="5">
Image:Image_large.png |[http://pymolwiki.org/index.php/File:Image_large.png MD simulation of protein-protein binding ]'''Pymol generated Movie is avialable inside pdf'''[[http://www.pymolwiki.org/index.php/File:SH3.pdf]] ''' or high quality AVI format'''[http://gepard.bioinformatik.uni-saarland.de/old_html/material/dl/SH3_large.avi]
Image:Cover_JCIM_2008_48-10.png|[http://pubs.acs.org/action/showLargeCover?issue=329743592 J. Chem. Inf. Model., 2008, 48 (10)]
Image:Science090410.jpg|[http://www.sciencemag.org/content/vol324/issue5924/index.dtl Protein Dynamics]
Image:080701_h.a.steinberg_biochemie.jpg|'''Targeting DNA''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236236%232008%23999099992%23693363%23FLA%23&_cdi=6236&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=3e9cfd266720a7645cec65b2bfbd7645 BIOCHEMIE], July 1, 2008 Cover, Vol. 90.
Image:080602cnen.pdf.jpg|'''Harnessing Helices''', [http://pubs.acs.org/cen/coverstory/86/8622aboutcover.html Chemical & Engineering News], June 2, 2008 Cover, Vol. 86, Issue 22.
Image:080118_h.a.steinberg_JBC.jpg|''' Fusarium head blight (FHB)''', [http://www.jbc.org/content/vol283/issue3/cover.shtml JBC], January 18, 2008 Cover, Vol. 283, Issue 3.
Image:071213nature.pdf.jpg|'''Pumping Ions''', [http://www.nature.com/nature/journal/v450/n7172/index.html Nature], Dec. 13th, 2007.
Image:0712channels.jpg|[http://www.landesbioscience.com/journals/channels/toc/1/6], Dec 2007.
Image:071123science.pdf.jpg|[http://www.sciencemag.org/content/vol318/issue5854/index.dtl Science], Nov. 23rd, 2007.
Image:071120pnas.jpg|'''Sensing Calciums'''[http://www.pnas.org/content/104/47.toc], Nov 20th, 2007.
Image:071113Structure.png|'''Aminoacyl-tRNA synthetases from human mitochondria'''[http://www.cell.com/structure/issue?pii=S0969-2126(07)X0180-1], Nov. 13th, 2007.
Image:071009science.pdf.jpg|[http://www.sciencemag.org/content/vol318/issue5849/index.dtl Science], Oct. 19th, 2007.
Image:070920nature.pdf.jpg|'''Sensing Acid''', [http://www.nature.com/nature/journal/v449/n7160/index.html Nature], Sept. 20th, 2007.
Image:070816nature.pdf.jpg|'''Form Finds Function?''', [http://www.nature.com/nature/journal/v448/n7155/index.html Nature], Aug. 16thm 2007.
Image:Largecover.gif|[http://www.nature.com/neuro/journal/v10/n8/abs/nn1942.html Nature Neuroscience] Vol. 10 No. 8 Aug. 2007
Image:070803_h.a.steinberg_molec_cell.jpg|'''Paused transcription complexes''', [http://www.cell.com/molecular-cell/issue?pii=S1097-2765(07)X0175-8# Molecular Cell], August 3 2007 Cover, Vol. 27, Issue 3.
Image:070415.h.a.steinberg_ABB.jpg|'''Vitamin D''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_cdi=6701&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=b9733feacdee17300b6b31649737997b&jchunk=460#460 ABB], April 14 2007 Cover, Vol. 460, Issue 2.
Image:070405nature.pdf.jpg|'''Auxin Action Revealed''', [http://www.nature.com/nature/journal/v446/n7136/index.html Nature], April 5, 2007.
Image:070301_h.a.steinberg_protein_science.jpg|'''Glucose-1-phosphate uridylyltransferase''', [http://www.proteinscience.org/content/vol16/issue3/cover.shtml Protein Science], March 3, 2007 Cover, Volume 16 Issue 3.
Image:070219cnen.pdf.jpg|'''How Ribosomes Work''', [http://pubs.acs.org/cen/coverstory/85/8508aboutcover.html Chemical & Engineering News], Feb. 19th, 2007.
Image:070215nature.pdf.jpg|'''HIV's Hidden Weakness''', [http://www.nature.com/nature/journal/v445/n7129/index.html Nature], Feb. 15th, 2007.
Image:061208_h.a.steinberg_molec_cell.jpg|'''Sen1 Control of RNA Pol II Termination''', [http://www.molecule.org/content/issue?volume=24&issue=5 Molecular Cell], December 8, 2006 Cover, Volume 24 Issue 5.
Image:061201_h.a.steinberg_molec_micro.jpg|'''Transposon Loops''', [http://www.blackwell-synergy.com/toc/mmi/62/6 Molecular Microbiology], December 1, 2006 Cover, Volume 62 Issue 6.
Image:060904cnen.pdf.jpg|'''Glycosylation Engineering''', [http://pubs.acs.org/subscribe/journals/cen/84/i36/toc/toc_i36.html Chemical & Engineering News], Sept. 4th, 2006.
Image:060817nature.pdf.jpg|'''Chromatin Code Decoded''', [http://www.nature.com/nature/journal/v442/n7104/index.html Nature], Aug. 17th, 2006.
Image:060522cnen.pdf.jpg|'''Halogenases''', [http://pubs.acs.org/subscribe/journals/cen/84/i21/toc/toc_i21.html Chemical & Engineering News], May 22nd, 2006.
Image:060101_h.a.steinberg_protein_science.jpg|'''Poly (2S-proline)''', [http://www.proteinscience.org/content/vol15/issue1/cover.shtml Protein Science], January 1, 2006 Cover, Volume 15, Issue 1.
Image:050624_h.a.steinberg_JMB.jpg|'''Ribonuclease A''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236899%232005%23996459998%23609160%23FLA%23&_cdi=6899&_pubType=J&view=c&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=9623405850d13617453adb034fb10a81 JMB], November 18, 2005 Cover, Volume 354, Issue 1.
Image:051020nature.pdf.jpg|'''The B to Z of DNA''', [http://www.nature.com/nature/journal/v437/n7062/index.html Nature], Oct. 20th, 2005.

Image:050923_h.a.steinberg_JBC.jpg|'''GalNAc kinase''', [http://www.jbc.org/content/vol280/issue38/cover.shtml JBC], September 23, 2005 Cover, Volume 280, Issue 38.
Image:050908nature.pdf.jpg|'''Neurotransmission''', [http://www.nature.com/nature/journal/v437/n7056/index.html Nature], Sept. 8th, 2005.
Image:050722science.pdf.jpg|[http://www.sciencemag.org/content/vol309/issue5734/index.dtl Science], July 22nd, 2005.
Image:050624_h.a.steinberg_jmb1.jpg|[http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236899%232005%23996509994%23597371%23FLA%23&_cdi=6899&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=0bc37bcef231976694d0fbe8920ef596 JMB], June 24, 2005 Cover, Volume 349, Issue 5.
Image:050609nature.pdf.jpg|'''Probing Prions''', [http://www.nature.com/nature/journal/v435/n7043/index.html Nature], June 9th, 2005.
Image:050429science.pdf.jpg|[http://www.sciencemag.org/content/vol308/issue5722/index.dtl Science], April 29th, 2005.
Image:040910science.pdf.jpg|[http://www.sciencemag.org/content/vol305/issue5690/index.dtl Science], Sept., 10th, 2004.
Image:040123science.pdf.jpg|[http://www.sciencemag.org/content/vol303/issue5657/index.dtl Science], Jan. 23rd, 2004.
Image:apr2003_ProtSci.png|''Pae'' SmAP1, [http://www3.interscience.wiley.com/journal/121602086/issue ''Protein Science'', April 2003]
Image:Ribbon_hh1.png|[http://www.chembiol.com/content/issue?volume=15&issue=4 Chem. Biol.]
Image:0903_1_1.jpg|[http://pubs.acs.org/journals/achre4/covers/36/articleWindow.achre4.091603.html Accounts of Chemical Research]
</gallery>

File:Apr2003 ProtSci.png

2009-11-10T03:54:57Z

Cmura:

Covers

2009-11-10T03:54:06Z

Cmura:

= PyMOL-created Journal Covers =
Part of PyMOL's popularity comes from the fact that it is very flexible and it offers arbitrarily high-resolution images as output; this make it a great tool for making journal covers or any press-related images.

Here are some of the known PyMOL-created Journal Covers. There are surely more out there. If you have a cover you'd like to add, feel free.

<gallery perrow="5">
Image:Image_large.png |[http://pymolwiki.org/index.php/File:Image_large.png MD simulation of protein-protein binding ]'''Pymol generated Movie is avialable inside pdf'''[[http://www.pymolwiki.org/index.php/File:SH3.pdf]] ''' or high quality AVI format'''[http://gepard.bioinformatik.uni-saarland.de/old_html/material/dl/SH3_large.avi]
Image:Cover_JCIM_2008_48-10.png|[http://pubs.acs.org/action/showLargeCover?issue=329743592 J. Chem. Inf. Model., 2008, 48 (10)]
Image:Science090410.jpg|[http://www.sciencemag.org/content/vol324/issue5924/index.dtl Protein Dynamics]
Image:080701_h.a.steinberg_biochemie.jpg|'''Targeting DNA''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236236%232008%23999099992%23693363%23FLA%23&_cdi=6236&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=3e9cfd266720a7645cec65b2bfbd7645 BIOCHEMIE], July 1, 2008 Cover, Vol. 90.
Image:080602cnen.pdf.jpg|'''Harnessing Helices''', [http://pubs.acs.org/cen/coverstory/86/8622aboutcover.html Chemical & Engineering News], June 2, 2008 Cover, Vol. 86, Issue 22.
Image:080118_h.a.steinberg_JBC.jpg|''' Fusarium head blight (FHB)''', [http://www.jbc.org/content/vol283/issue3/cover.shtml JBC], January 18, 2008 Cover, Vol. 283, Issue 3.
Image:071213nature.pdf.jpg|'''Pumping Ions''', [http://www.nature.com/nature/journal/v450/n7172/index.html Nature], Dec. 13th, 2007.
Image:0712channels.jpg|[http://www.landesbioscience.com/journals/channels/toc/1/6], Dec 2007.
Image:071123science.pdf.jpg|[http://www.sciencemag.org/content/vol318/issue5854/index.dtl Science], Nov. 23rd, 2007.
Image:071120pnas.jpg|'''Sensing Calciums'''[http://www.pnas.org/content/104/47.toc], Nov 20th, 2007.
Image:071113Structure.png|'''Aminoacyl-tRNA synthetases from human mitochondria'''[http://www.cell.com/structure/issue?pii=S0969-2126(07)X0180-1], Nov. 13th, 2007.
Image:071009science.pdf.jpg|[http://www.sciencemag.org/content/vol318/issue5849/index.dtl Science], Oct. 19th, 2007.
Image:070920nature.pdf.jpg|'''Sensing Acid''', [http://www.nature.com/nature/journal/v449/n7160/index.html Nature], Sept. 20th, 2007.
Image:070816nature.pdf.jpg|'''Form Finds Function?''', [http://www.nature.com/nature/journal/v448/n7155/index.html Nature], Aug. 16thm 2007.
Image:Largecover.gif|[http://www.nature.com/neuro/journal/v10/n8/abs/nn1942.html Nature Neuroscience] Vol. 10 No. 8 Aug. 2007
Image:070803_h.a.steinberg_molec_cell.jpg|'''Paused transcription complexes''', [http://www.cell.com/molecular-cell/issue?pii=S1097-2765(07)X0175-8# Molecular Cell], August 3 2007 Cover, Vol. 27, Issue 3.
Image:070415.h.a.steinberg_ABB.jpg|'''Vitamin D''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_cdi=6701&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=b9733feacdee17300b6b31649737997b&jchunk=460#460 ABB], April 14 2007 Cover, Vol. 460, Issue 2.
Image:070405nature.pdf.jpg|'''Auxin Action Revealed''', [http://www.nature.com/nature/journal/v446/n7136/index.html Nature], April 5, 2007.
Image:070301_h.a.steinberg_protein_science.jpg|'''Glucose-1-phosphate uridylyltransferase''', [http://www.proteinscience.org/content/vol16/issue3/cover.shtml Protein Science], March 3, 2007 Cover, Volume 16 Issue 3.
Image:070219cnen.pdf.jpg|'''How Ribosomes Work''', [http://pubs.acs.org/cen/coverstory/85/8508aboutcover.html Chemical & Engineering News], Feb. 19th, 2007.
Image:070215nature.pdf.jpg|'''HIV's Hidden Weakness''', [http://www.nature.com/nature/journal/v445/n7129/index.html Nature], Feb. 15th, 2007.
Image:061208_h.a.steinberg_molec_cell.jpg|'''Sen1 Control of RNA Pol II Termination''', [http://www.molecule.org/content/issue?volume=24&issue=5 Molecular Cell], December 8, 2006 Cover, Volume 24 Issue 5.
Image:061201_h.a.steinberg_molec_micro.jpg|'''Transposon Loops''', [http://www.blackwell-synergy.com/toc/mmi/62/6 Molecular Microbiology], December 1, 2006 Cover, Volume 62 Issue 6.
Image:060904cnen.pdf.jpg|'''Glycosylation Engineering''', [http://pubs.acs.org/subscribe/journals/cen/84/i36/toc/toc_i36.html Chemical & Engineering News], Sept. 4th, 2006.
Image:060817nature.pdf.jpg|'''Chromatin Code Decoded''', [http://www.nature.com/nature/journal/v442/n7104/index.html Nature], Aug. 17th, 2006.
Image:060522cnen.pdf.jpg|'''Halogenases''', [http://pubs.acs.org/subscribe/journals/cen/84/i21/toc/toc_i21.html Chemical & Engineering News], May 22nd, 2006.
Image:060101_h.a.steinberg_protein_science.jpg|'''Poly (2S-proline)''', [http://www.proteinscience.org/content/vol15/issue1/cover.shtml Protein Science], January 1, 2006 Cover, Volume 15, Issue 1.
Image:050624_h.a.steinberg_JMB.jpg|'''Ribonuclease A''', [http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236899%232005%23996459998%23609160%23FLA%23&_cdi=6899&_pubType=J&view=c&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=9623405850d13617453adb034fb10a81 JMB], November 18, 2005 Cover, Volume 354, Issue 1.
Image:051020nature.pdf.jpg|'''The B to Z of DNA''', [http://www.nature.com/nature/journal/v437/n7062/index.html Nature], Oct. 20th, 2005.

Image:050923_h.a.steinberg_JBC.jpg|'''GalNAc kinase''', [http://www.jbc.org/content/vol280/issue38/cover.shtml JBC], September 23, 2005 Cover, Volume 280, Issue 38.
Image:050908nature.pdf.jpg|'''Neurotransmission''', [http://www.nature.com/nature/journal/v437/n7056/index.html Nature], Sept. 8th, 2005.
Image:050722science.pdf.jpg|[http://www.sciencemag.org/content/vol309/issue5734/index.dtl Science], July 22nd, 2005.
Image:050624_h.a.steinberg_jmb1.jpg|[http://www.sciencedirect.com/science?_ob=PublicationURL&_tockey=%23TOC%236899%232005%23996509994%23597371%23FLA%23&_cdi=6899&_pubType=J&_auth=y&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=0bc37bcef231976694d0fbe8920ef596 JMB], June 24, 2005 Cover, Volume 349, Issue 5.
Image:050609nature.pdf.jpg|'''Probing Prions''', [http://www.nature.com/nature/journal/v435/n7043/index.html Nature], June 9th, 2005.
Image:050429science.pdf.jpg|[http://www.sciencemag.org/content/vol308/issue5722/index.dtl Science], April 29th, 2005.
Image:040910science.pdf.jpg|[http://www.sciencemag.org/content/vol305/issue5690/index.dtl Science], Sept., 10th, 2004.
Image:040123science.pdf.jpg|[http://www.sciencemag.org/content/vol303/issue5657/index.dtl Science], Jan. 23rd, 2004.
Image:apr2003_ProtSci.png|[http://www3.interscience.wiley.com/journal/121602086/issue Protein Science], April 2003.
Image:Ribbon_hh1.png|[http://www.chembiol.com/content/issue?volume=15&issue=4 Chem. Biol.]
Image:0903_1_1.jpg|[http://pubs.acs.org/journals/achre4/covers/36/articleWindow.achre4.091603.html Accounts of Chemical Research]
</gallery>

User:Cmura

2005-07-22T18:33:09Z

Cmura:

User:Cmura

2005-07-22T18:32:53Z

Cmura:

<span style="font-size:larger;">'''Nascent version of Cmura's PyMolWiki stuff...'''</span><br />
Some PyMOL-related stuff (scripts and whatnot) will be entered into PyMolWiki and linked from here soon...

For the time being, please visit "[http://mccammon.ucsd.edu/~cmura/PyMOL/ Cam's PyMOL page]"

-------------------------------------------------------
Cameron Mura
Email: cmura@mccammon.ucsd.edu
WWW: http://mccammon.ucsd.edu/~cmura
-------------------------------------------------------

----

User:Cmura

2005-07-22T18:32:30Z

Cmura:

<span style="font-size:larger;">'''Nascent version of Cmura's PyMolWiki stuff...'''</span><br />
Some PyMOL-related stuff (scripts and whatnot) will be entered into PyMolWiki and linked from here soon...

For the time being, please visit "[http://mccammon.ucsd.edu/~cmura/PyMOL/ Cam's PyMOL page]"
<nowiki>
-------------------------------------------------------
Cameron Mura
Email: cmura@mccammon.ucsd.edu
WWW: http://mccammon.ucsd.edu/~cmura
-------------------------------------------------------
</nowiki>

User:Cmura

2005-07-22T18:31:44Z

Cmura:

<span style="font-size:larger;">'''Nascent version of Cmura's PyMolWiki stuff...'''</span><br />
Some PyMOL-related stuff (scripts and whatnot) will be entered into PyMolWiki and linked from here soon...

For the time being, please visit "[http://mccammon.ucsd.edu/~cmura/PyMOL/ Cam's PyMOL page]"

-------------------------------------------------------
Cameron Mura
Urey Hall, Rm. 4234
Department of Chemistry & Biochemistry
University of California, San Diego
9500 Gilman Dr. Dept. 0365
La Jolla, CA 92093-0365
Email: cmura@mccammon.ucsd.edu
WWW: http://mccammon.ucsd.edu/~cmura
Phone: 858.534.0956
Fax: 858.534.7042 (old)
Fax: 858.534.4974 (new)
-------------------------------------------------------

Cmura

2005-04-04T18:37:24Z

Cmura: Cmura moved to User:Cmura

#REDIRECT [[User:Cmura]]

User:Cmura

2005-04-04T18:29:28Z

Cmura:

User:Cmura

2005-04-04T18:27:24Z

Cmura:

'''Nascent version of Cam's PyMolWiki stuff...'''<br />
(Scripts and whatnot to go here soon...)

For the time being, please visit "[http://mccammon.ucsd.edu/~cmura/PyMOL/ Cam's PyMOL page]"

Main Page

2005-04-04T18:04:02Z

Cmura: /* PyMol Wiki Home */

== PyMol Wiki Home ==
You have reached the home of the PyMolWiki, a user-driven web-oriented CMS.

We provide
* updates on [http://pymol.sf.net PyMol]
* a stable user-oriented documentation base
* a thorough treatment of the PyMol program
* feature-rich scripts for general PyMol use

== Links of Interest ==
* [[TOPTOC|Top Level Table of Contents]]
* [[:Category:FAQ|Frequently Asked Questions]] -- new!

* [[PyMolWiki:Community_Portal| How to get involved!]] -- read me if you want to add something
* [[:Category:Scripting Script Library| Script Library]] -- add one! (rTools info!)
* [[:Category:Commands|PyMol Commands]] (>130 documented!)
* [[:Special:Allpages| All Pages]]
* [[:Category:Plugins|Plugins]]
* [[:Special:Categories| See All Categories]]