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News & Updates POSF PyMOL Open-Source Fellowship program accepting applications for 2018-2019 New Plugin ProBiS H2O is a new plugin for identification of conserved waters in protein structures. Official Release PyMOL v2.1 has been released on March 13, 2018. Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll! Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm. New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds. New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. 3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. Older News See Older News.

Did you know... Intra rms cur intra_rms_cur calculates rms values for all states of an object over an atom selection relative to the indicated state without performing any fitting. The rms values are returned as a python array. PYMOL API cmd.intra_rms_cur( string selection, int state) PYTHON EXAMPLE from pymol import cmd rms = cmd.intra_rms_cur("(name ca)",1) USER EXAMPLES/COMMENTS See Rms for selection caveats for this group of commands. SEE ALSO Fit, Rms, Rms_Cur, Intra_Fit, Intra_Rms, Pair_Fit

A Random PyMOL-generated Cover. See Covers.