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News & Updates Official Release PyMOL v1.8.2 has been released on April 20, 2016. New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm. Official Release PyMOL v1.8.0 has been released on Nov 18, 2015. PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015. New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds. New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. 3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. Older News See Older News.

Did you know... Measure Distance # This script writes the distance from # atom mol1///25/ha to atom mol1///26/ha # out to the file "dist.txt" # Simply change your selections to see different distances. # import PyMOL's command namespace from pymol import cmd # open dist.txt for writing f=open('dist.txt','w') # calculate the distance and store it in dst dst=cmd.distance('tmp','mol1///25/ha','mol1///26/ha') # write the formatted value of the distance (dst) # to the output file f.write("%8.3f\n"%dst) # close the output file. f.close() See Also Distance

A Random PyMOL-generated Cover. See Covers.